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BMCBI
2006
108views more  BMCBI 2006»
13 years 7 months ago
RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits
Background: Until today, analysis of 16S ribosomal RNA (rRNA) sequences has been the de-facto gold standard for the assessment of phylogenetic relationships among prokaryotes. How...
Hanno Teeling, Frank Oliver Glöckner
APBC
2003
138views Bioinformatics» more  APBC 2003»
13 years 9 months ago
A New Approach to Protein Structure and Function Analysis Using Semi-structured Databases
The development of high-throughput genome sequencing and protein structure determination techniques have provided researchers with a wealth of biological data. Integrated analysis...
William M. Shui, Raymond K. Wong, Stephen C. Graha...
SCAM
2006
IEEE
14 years 1 months ago
SMART C: A Semantic Macro Replacement Translator for C
Programmers often want to transform the source or binary representations of their programs (e.g., to optimize, add dynamic safety checks, or add profile gathering code). Unfortun...
Matthew Jacobs, E. Christopher Lewis
BMCBI
2007
169views more  BMCBI 2007»
13 years 7 months ago
The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats
Background: In Archeae and Bacteria, the repeated elements called CRISPRs for "clustered regularly interspaced short palindromic repeats" are believed to participate in ...
Ibtissem Grissa, Gilles Vergnaud, Christine Pource...