66 search results - page 4 / 14 » Cache-Oblivious Dynamic Programming for Bioinformatics |
BIOINFORMATICS
2007
13 years 7 months ago
2007
Motivation: High-throughput expression profiling allows researchers to study gene activities globally. Genes with similar expression profiles are likely to encode proteins that ma...
BIBE
2007
IEEE
14 years 1 months ago
2007
IEEE
Systolic implementations of dynamic programming solutions that utilize a similarity matrix can achieve appreciable performance with both course- and fine-grain parallelization. A ...
BMCBI
2008
13 years 7 months ago
2008
Background: There is accumulating evidence that the milieu of repeat elements and other nongenic sequence features at a given chromosomal locus, here defined as the genome environ...
BIBE
2007
IEEE
14 years 1 months ago
2007
IEEE
— Methods for reliable synthesis of long genes offer great promise for protein synthesis via expression of synthetic genes, with applications to improved analysis of protein stru...
CSB
2004
IEEE
13 years 11 months ago
2004
IEEE
We describe a novel hardware architecture for genomic and proteomic sequence alignment which achieves a speed-up of two to three orders of magnitude over Smith-Waterman dynamic pr...