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BMCBI
2011
13 years 4 months ago
RedundancyMiner: De-replication of redundant GO categories in microarray and proteomics analysis
Background: The Gene Ontology (GO) Consortium organizes genes into hierarchical categories based on biological process, molecular function and subcellular localization. Tools such...
Barry Zeeberg, Hongfang Liu, Ari B. Kahn, Martin E...
CIKM
2011
Springer
12 years 9 months ago
LogSig: generating system events from raw textual logs
Modern computing systems generate large amounts of log data. System administrators or domain experts utilize the log data to understand and optimize system behaviors. Most system ...
Liang Tang, Tao Li, Chang-Shing Perng
CCGRID
2007
IEEE
14 years 3 months ago
Exploiting Lustre File Joining for Effective Collective IO
Lustre is a parallel file system that presents high aggregated IO bandwidth by striping file extents across many storage devices. However, our experiments indicate excessively wid...
Weikuan Yu, Jeffrey S. Vetter, Shane Canon, Song J...
ASPLOS
2012
ACM
12 years 4 months ago
Chameleon: operating system support for dynamic processors
The rise of multi-core processors has shifted performance efforts towards parallel programs. However, single-threaded code, whether from legacy programs or ones difficult to para...
Sankaralingam Panneerselvam, Michael M. Swift
WABI
2009
Springer
102views Bioinformatics» more  WABI 2009»
14 years 3 months ago
A Tree Based Method for the Rapid Screening of Chemical Fingerprints
Background: The fingerprint of a molecule is a bitstring based on its structure, constructed such that structurally similar molecules will have similar fingerprints. Molecular fin...
Thomas G. Kristensen, Jesper Nielsen, Christian N....