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» Can we Find Molecular Signatures from Gene Expression Data
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HPDC
2010
IEEE
13 years 11 months ago
Mendel: efficiently verifying the lineage of data modified in multiple trust domains
Data is routinely created, disseminated, and processed in distributed systems that span multiple administrative domains. To maintain accountability while the data is transformed b...
Ashish Gehani, Minyoung Kim
BMCBI
2007
165views more  BMCBI 2007»
13 years 10 months ago
Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
Background: Manual curation of biological databases, an expensive and labor-intensive process, is essential for high quality integrated data. In this paper we report the implement...
Carlos Rodríguez Penagos, Heladia Salgado, ...
BMCBI
2010
138views more  BMCBI 2010»
13 years 10 months ago
UFFizi: a generic platform for ranking informative features
Background: Feature selection is an important pre-processing task in the analysis of complex data. Selecting an appropriate subset of features can improve classification or cluste...
Assaf Gottlieb, Roy Varshavsky, Michal Linial, Dav...
BMCBI
2005
114views more  BMCBI 2005»
13 years 9 months ago
Quality determination and the repair of poor quality spots in array experiments
Background: A common feature of microarray experiments is the occurence of missing gene expression data. These missing values occur for a variety of reasons, in particular, becaus...
Brian D. M. Tom, Walter R. Gilks, Elizabeth T. Bro...
BMCBI
2010
136views more  BMCBI 2010»
13 years 10 months ago
The IronChip evaluation package: a package of perl modules for robust analysis of custom microarrays
Background: Gene expression studies greatly contribute to our understanding of complex relationships in gene regulatory networks. However, the complexity of array design, producti...
Yevhen Vainshtein, Mayka Sanchez, Alvis Brazma, Ma...