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BMCBI
2006
141views more  BMCBI 2006»
13 years 7 months ago
Identification of consensus RNA secondary structures using suffix arrays
Background: The identification of a consensus RNA motif often consists in finding a conserved secondary structure with minimum free energy in an ensemble of aligned sequences. How...
Mohammad Anwar, Truong Nguyen, Marcel Turcotte
BMCBI
2006
156views more  BMCBI 2006»
13 years 7 months ago
Detecting the limits of regulatory element conservation and divergence estimation using pairwise and multiple alignments
Background: Molecular evolutionary studies of noncoding sequences rely on multiple alignments. Yet how multiple alignment accuracy varies across sequence types, tree topologies, d...
Daniel A. Pollard, Alan M. Moses, Venky N. Iyer, M...
IJMMS
2008
72views more  IJMMS 2008»
13 years 7 months ago
Zoom interaction design for pen-operated portable devices
Maps are currently the most common application domain for ZUIs. Standard techniques for controlling such interfaces on pen-operated devices usually rely on sequential interaction,...
Thorsten Büring, Jens Gerken, Harald Reiterer
JCT
2008
109views more  JCT 2008»
13 years 7 months ago
Decomposing Berge graphs and detecting balanced skew partitions
A hole in a graph is an induced cycle on at least four vertices. A graph is Berge if it has no odd hole and if its complement has no odd hole. In 2002, Chudnovsky, Robertson, Seym...
Nicolas Trotignon
JSAC
2008
111views more  JSAC 2008»
13 years 7 months ago
Socially-aware routing for publish-subscribe in delay-tolerant mobile ad hoc networks
Abstract--Applications involving the dissemination of information directly relevant to humans (e.g., service advertising, news spreading, environmental alerts) often rely on publis...
Paolo Costa, Cecilia Mascolo, Mirco Musolesi, Gian...