44 search results - page 7 / 9 » Canonical RNA Pseudoknot Structures |
IPPS
2007
IEEE
14 years 1 months ago
2007
IEEE
Ribonucleic acid (RNA) molecules play important roles in many biological processes including gene expression and regulation. An RNA molecule is a linear polymer which folds back o...
RECOMB
2009
Springer
14 years 8 months ago
2009
Springer
Prediction and alignment of RNA pseudoknot structures are NP-hard. Nevertheless, several efficient prediction algorithms by dynamic programming have been proposed for restricted cl...
DNA
2009
Springer
14 years 2 months ago
2009
Springer
Knowledge of energy barriers between pairs of secondary structures for a given DNA or RNA molecule is useful, both in understanding RNA function in biological settings and in desig...
IPPS
2008
IEEE
14 years 2 months ago
2008
IEEE
Despite the computing power of emerging technologies, predicting long RNA secondary structures with thermodynamics-based methods is still infeasible, especially if the structures ...
IPPS
2009
IEEE
14 years 2 months ago
2009
IEEE
In this paper we describe the parallelization of a dynamic programming algorithm used to find common RNA secondary structures including pseudoknots and similar structures. The se...