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» Case Study: Visualization of annotated DNA sequences
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NAR
2007
90views more  NAR 2007»
13 years 8 months ago
The SUPERFAMILY database in 2007: families and functions
The SUPERFAMILY database provides protein domain assignments, at the SCOP ‘superfamily’ level, for the predicted protein sequences in over 400 completed genomes. A superfamily...
Derek Wilson, Martin Madera, Christine Vogel, Cyru...
BMCBI
2005
302views more  BMCBI 2005»
13 years 8 months ago
CGHPRO - A comprehensive data analysis tool for array CGH
Background: Array CGH (Comparative Genomic Hybridisation) is a molecular cytogenetic technique for the genome wide detection of chromosomal imbalances. It is based on the cohybrid...
Wei Chen, Fikret Erdogan, H.-Hilger Ropers, Steffe...
ICDT
2003
ACM
150views Database» more  ICDT 2003»
14 years 1 months ago
Bioinformatics Adventures in Database Research
Informatics has helped launch molecular biology into the genomic era. It appears certain that informatics will remain a major contributor to molecular biology in the post-genome er...
Jinyan Li, See-Kiong Ng, Limsoon Wong
APSEC
2009
IEEE
14 years 1 days ago
Sequence Diagram Slicing
Software visualization with sequence diagrams is one of the promising techniques aimed at helping developers comprehend the behavior of object-oriented systems effectively. However...
Kunihiro Noda, Takashi Kobayashi, Kiyoshi Agusa, S...
BMCBI
2006
103views more  BMCBI 2006»
13 years 8 months ago
Cis-motifs upstream of the transcription and translation initiation sites are effectively revealed by their positional disequili
Background: The discovery of cis-regulatory motifs still remains a challenging task even though the number of sequenced genomes is constantly growing. Computational analyses using...
Kenneth W. Berendzen, Kurt Stüber, Klaus Hart...