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» Cell Modeling Using Agent-Based Formalisms
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FMSB
2008
138views Formal Methods» more  FMSB 2008»
13 years 11 months ago
Combining Intra- and Inter-cellular Dynamics to Investigate Intestinal Homeostasis
Abstract. This paper reports on the multi-scale modelling of an intestinal crypt cellular structure coupled with Wnt signalling. Using formal modelling techniques based on the stoc...
Oksana Tymchyshyn, Marta Z. Kwiatkowska
ANSS
2001
IEEE
14 years 1 months ago
Models of Complex Physical Systems Using Cell-DEVS
We present the definition of diverse models of physical systems using the Cell-DEVS paradigm. Cell-DEVS is an extension of the DEVS formalism that allows the definition of cellula...
Javier Ameghino, Alejandro Troccoli, Gabriel A. Wa...
FMSB
2008
199views Formal Methods» more  FMSB 2008»
13 years 11 months ago
Bounded Asynchrony: Concurrency for Modeling Cell-Cell Interactions
We introduce bounded asynchrony, a notion of concurrency tailored to the modeling of biological cell-cell interactions. Bounded asynchrony is the result of a scheduler that bounds ...
Jasmin Fisher, Thomas A. Henzinger, Maria Mateescu...
ICCAD
2006
IEEE
138views Hardware» more  ICCAD 2006»
14 years 6 months ago
Analytical modeling of SRAM dynamic stability
In this paper, for the first time, a theory for evaluating dynamic noise margins of SRAM cells is developed analytically. The results allow predicting the transient error suscepti...
Bin Zhang, Ari Arapostathis, Sani R. Nassif, Micha...
CMSB
2009
Springer
14 years 1 months ago
On Coupling Models Using Model-Checking: Effects of Irinotecan Injections on the Mammalian Cell Cycle
Abstract. In systems biology, the number of models of cellular processes increases rapidly, but re-using models in different contexts or for different questions remains a challengi...
Elisabetta De Maria, François Fages, Sylvai...