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» Characterization, Stability and Convergence of Hierarchical ...
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BMCBI
2008
104views more  BMCBI 2008»
13 years 7 months ago
Evolutionary Pareto-optimization of stably folding peptides
Background: As a rule, peptides are more flexible and unstructured than proteins with their substantial stabilizing hydrophobic cores. Nevertheless, a few stably folding peptides ...
Wolfram Gronwald, Tim Hohm, Daniel Hoffmann
INFOCOM
2006
IEEE
14 years 1 months ago
A Locating-First Approach for Scalable Overlay Multicast
— Recent proposals in multicast overlay construction have demonstrated the importance of exploiting underlying network topology. However, these topology-aware proposals often rel...
Mohamed Ali Kâafar, Thierry Turletti, Walid ...
BMCBI
2007
146views more  BMCBI 2007»
13 years 7 months ago
Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
BMCBI
2005
198views more  BMCBI 2005»
13 years 7 months ago
Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
Background: The sequencing of the human genome has enabled us to access a comprehensive list of genes (both experimental and predicted) for further analysis. While a majority of t...
Qicheng Ma, Gung-Wei Chirn, Richard Cai, Joseph D....
INFOCOM
2010
IEEE
13 years 5 months ago
Cross-layer Optimization for Wireless Networks with Deterministic Channel Models
Abstract—Existing work on cross-layer optimization for wireless networks adopts simple physical-layer models, i.e., treating interference as noise. In this paper, we adopt a dete...
Ziyu Shao, Minghua Chen, Salman Avestimehr, Shuo-Y...