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» Characterizations of postman sets
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130
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RECOMB
2004
Springer
16 years 4 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
RECOMB
2003
Springer
16 years 4 months ago
Accurate detection of very sparse sequence motifs
Protein sequence alignments are more reliable the shorter the evolutionary distance. Here, we align distantly related proteins using many closely spaced intermediate sequences as ...
Andreas Heger, Michael Lappe, Liisa Holm
STOC
2005
ACM
96views Algorithms» more  STOC 2005»
16 years 4 months ago
Every monotone graph property is testable
A graph property is called monotone if it is closed under taking (not necessarily induced) subgraphs (or, equivalently, if it is closed under removal of edges and vertices). Many ...
Noga Alon, Asaf Shapira
STOC
2004
ACM
61views Algorithms» more  STOC 2004»
16 years 4 months ago
The zero-one principle for switching networks
Recently, approximation analysis has been extensively used to study algorithms for routing weighted packets in various network settings. Although different techniques were applied...
Yossi Azar, Yossi Richter
207
Voted
VLDB
2008
ACM
127views Database» more  VLDB 2008»
16 years 4 months ago
Delay aware querying with Seaweed
Large highly distributed data sets are poorly supported by current query technologies. Applications such as endsystembased network management are characterized by data stored on l...
Dushyanth Narayanan, Austin Donnelly, Richard Mort...