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» Characterizing zero-derivative points
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SIGCOMM
2003
ACM
14 years 28 days ago
Towards an accurate AS-level traceroute tool
Traceroute is widely used to detect routing problems, characterize end-to-end paths, and discover the Internet topology. Providing an accurate list of the Autonomous Systems (ASes...
Zhuoqing Morley Mao, Jennifer Rexford, Jia Wang, R...
ICALP
2003
Springer
14 years 27 days ago
Similarity Matrices for Pairs of Graphs
Abstract. We introduce a concept of similarity between vertices of directed graphs. Let GA and GB be two directed graphs with respectively nA and nB vertices. We define a nA × nB...
Vincent D. Blondel, Paul Van Dooren
BIBE
2010
IEEE
144views Bioinformatics» more  BIBE 2010»
13 years 8 months ago
Knowledge-Guided Docking of Flexible Ligands to SH2 Domain Proteins
Studies of interactions between protein domains and ligands are important in many aspects such as cellular signaling and regulation. In this work, we applied a three-stage knowledg...
Haiyun Lu, Shamima Banu Bte Sm Rashid, Hao Li, Wee...
BMCBI
2010
133views more  BMCBI 2010»
13 years 7 months ago
Stability analysis of the GAL regulatory network in Saccharomyces cerevisiae and Kluyveromyces lactis
Background: In the yeast Saccharomyces cerevisiae, interactions between galactose, Gal3p, Gal80p, and Gal4p determine the transcriptional status of the genes required for the gala...
Vishwesh V. Kulkarni, Venkatesh Kareenhalli, Pushk...
BMCBI
2007
99views more  BMCBI 2007»
13 years 7 months ago
The Deuterator: software for the determination of backbone amide deuterium levels from H/D exchange MS data
Background: The combination of mass spectrometry and solution phase amide hydrogen/deuterium exchange (H/D exchange) experiments is an effective method for characterizing protein ...
B. D. Pascal, M. J. Chalmers, S. A. Busby, C. C. M...