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RECOMB
2004
Springer
14 years 8 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler
ICDE
1999
IEEE
98views Database» more  ICDE 1999»
14 years 9 months ago
Similarity Searching in Text Databases with Multiple Field Types
Similarity searching in text databases with multiple field types is still an open problem. We experimented with CORDIS and we evaluated the effectiveness of many text retrieval me...
Kostas Tzeras, Euripides G. M. Petrakis
KDD
2010
ACM
272views Data Mining» more  KDD 2010»
13 years 7 months ago
Scalable similarity search with optimized kernel hashing
Scalable similarity search is the core of many large scale learning or data mining applications. Recently, many research results demonstrate that one promising approach is creatin...
Junfeng He, Wei Liu, Shih-Fu Chang
SSD
1999
Springer
197views Database» more  SSD 1999»
14 years 22 days ago
3D Shape Histograms for Similarity Search and Classification in Spatial Databases
Classification is one of the basic tasks of data mining in modern database applications including molecular biology, astronomy, mechanical engineering, medical imaging or meteorolo...
Mihael Ankerst, Gabi Kastenmüller, Hans-Peter...
ISMB
1996
13 years 9 months ago
Compact Encoding Strategies for DNA Sequence Similarity Search
Determining whether two DNA sequences are similar is an essential component of DNA sequence analysis. Dynamic programming is the algorithm of choice if computational time is not t...
David J. States, Pankaj Agarwal