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» Cis-regulatory module detection using constraint programming
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BMCBI
2006
155views more  BMCBI 2006»
13 years 9 months ago
AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data
Background: DNA microarrays are a powerful tool for monitoring the expression of tens of thousands of genes simultaneously. With the advance of microarray technology, the challeng...
Guoqing Lu, The V. Nguyen, Yuannan Xia, Michael Fr...
BMCBI
2008
114views more  BMCBI 2008»
13 years 9 months ago
WSPMaker: a web tool for calculating selection pressure in proteins and domains using window-sliding
Background: In the study of adaptive evolution, it is important to detect the protein coding sites where natural selection is acting. In general, the ratio of the rate of non-syno...
Yong Seok Lee, Tae-Hyung Kim, Tae-Wook Kang, Won-H...
GECCO
2005
Springer
14 years 2 months ago
Evaluating GP schema in context
We propose a new methodology to look at the fitness contributions (semantics) of different schemata in Genetic Programming (GP). We hypothesize that the significance of a schem...
Hammad Majeed, Conor Ryan, R. Muhammad Atif Azad
CPAIOR
2010
Springer
14 years 8 days ago
An In-Out Approach to Disjunctive Optimization
Cutting plane methods are widely used for solving convex optimization problems and are of fundamental importance, e.g., to provide tight bounds for Mixed-Integer Programs (MIPs). T...
Matteo Fischetti, Domenico Salvagnin
ETS
2009
IEEE
117views Hardware» more  ETS 2009»
13 years 6 months ago
A Two Phase Approach for Minimal Diagnostic Test Set Generation
We optimize the full-response diagnostic fault dictionary from a given test set. The smallest set of vectors is selected without loss of diagnostic resolution of the given test se...
Mohammed Ashfaq Shukoor, Vishwani D. Agrawal