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NAR
2000
117views more  NAR 2000»
15 years 4 months ago
The TIGR Gene Indices: reconstruction and representation of expressed gene sequences
Expressed sequence tags (ESTs) have provided a first glimpse of the collection of transcribed sequences in a variety of organisms. However, a careful analysis of this sequence dat...
John Quackenbush, Feng Liang, Ingeborg Holt, Geo P...
BMCBI
2006
166views more  BMCBI 2006»
15 years 4 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
BMCBI
2010
131views more  BMCBI 2010»
15 years 4 months ago
Prediction of epigenetically regulated genes in breast cancer cell lines
Background: Methylation of CpG islands within the DNA promoter regions is one mechanism that leads to aberrant gene expression in cancer. In particular, the abnormal methylation o...
Leandro A. Loss, Anguraj Sadanandam, Steffen Durin...
JCDL
2003
ACM
94views Education» more  JCDL 2003»
15 years 9 months ago
Content Access Characterization in Digital Libraries
To support non-trivial clients, such as data exploration and analysis environments, digital libraries must be able to describe the access modes that their contents support. We pre...
Greg Janee, James Frew, David Valentine
CORR
2010
Springer
108views Education» more  CORR 2010»
15 years 4 months ago
Constraint solvers: An empirical evaluation of design decisions
This paper presents an evaluation of the design decisions made in four state-of-the-art constraint solvers; Choco, ECLiPSe, Gecode, and Minion. To assess the impact of design deci...
Lars Kotthoff