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» Classifying protein sequences using hydropathy blocks
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JBCB
2010
138views more  JBCB 2010»
13 years 2 months ago
Hierarchical Classification of Gene Ontology Terms Using the Gostruct Method
Protein function prediction is an active area of research in bioinformatics. And yet, transfer of annotation on the basis of sequence or structural similarity remains widely used ...
Artem Sokolov, Asa Ben-Hur
ISMB
1998
13 years 9 months ago
Bayesian Protein Family Classifier
A Bayesian procedure for the simultaneous alignment and classification of sequences into subclasses is described. This Gibbs sampling algorithm iterates between an alignment step ...
Kunbin Qu, Lee Ann McCue, Charles E. Lawrence
COMAD
2008
13 years 9 months ago
REBMEC: Repeat Based Maximum Entropy Classifier for Biological Sequences
An important problem in biological data analysis is to predict the family of a newly discovered sequence like a protein or DNA sequence, using the collection of available sequence...
Pratibha Rani, Vikram Pudi
JBI
2008
137views Bioinformatics» more  JBI 2008»
13 years 7 months ago
Mining sequential patterns for protein fold recognition
Protein data contain discriminative patterns that can be used in many beneficial applications if they are defined correctly. In this work sequential pattern mining (SPM) is utiliz...
Themis P. Exarchos, Costas Papaloukas, Christos La...
ICRA
2006
IEEE
85views Robotics» more  ICRA 2006»
14 years 1 months ago
Design of Classifier to Automate the Evaluation of Protein Crystallization States
– This paper presents a method for designing classifier to automate an evaluation process of protein crystallization growth states. The classifier is designed by binary decision ...
Kanako Saitoh, Kuniaki Kawabata, Hajime Asama, Tak...