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118
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FCCM
2006
IEEE
137views VLSI» more  FCCM 2006»
15 years 8 months ago
Single Pass, BLAST-Like, Approximate String Matching on FPGAs
Abstract: Approximate string matching is fundamental to bioinformatics, and has been the subject of numerous FPGA acceleration studies. We address issues with respect to FPGA imple...
Martin C. Herbordt, Josh Model, Yongfeng Gu, Bhara...
125
Voted
ICDE
2006
IEEE
148views Database» more  ICDE 2006»
15 years 8 months ago
Estimating XML Structural Join Size Quickly and Economically
XML structural joins, which evaluate the containment (ancestor-descendant) relationships between XML elements, are important operations of XML query processing. Estimating structu...
Cheng Luo, Zhewei Jiang, Wen-Chi Hou, Feng Yan, Ch...
151
Voted
ICNP
2006
IEEE
15 years 8 months ago
DPTree: A Balanced Tree Based Indexing Framework for Peer-to-Peer Systems
— Peer-to-peer (P2P) systems have been widely used for exchange of voluminous information and resources among thousands or even millions of users. Since shared data are normally ...
Mei Li, Wang-Chien Lee, Anand Sivasubramaniam
128
Voted
ACIVS
2006
Springer
15 years 8 months ago
A Comparison of Nearest Neighbor Search Algorithms for Generic Object Recognition
The nearest neighbor (NN) classifier is well suited for generic object recognition. However, it requires storing the complete training data, and classification time is linear in ...
Ferid Bajramovic, Frank Mattern, Nicholas Butko, J...
BIBE
2005
IEEE
107views Bioinformatics» more  BIBE 2005»
15 years 8 months ago
DSIM: A Distance-Based Indexing Method for Genomic Sequences
In this paper, we propose a Distance-based Sequence Indexing Method (DSIM) for indexing and searching genome databases. Borrowing the idea of video compression, we compress the ge...
Xia Cao, Beng Chin Ooi, HweeHwa Pang, Kian-Lee Tan...