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» Closed Set Mining of Biological Data
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PKDD
2005
Springer
145views Data Mining» more  PKDD 2005»
14 years 1 months ago
A Correspondence Between Maximal Complete Bipartite Subgraphs and Closed Patterns
For an undirected graph ¢ without self-loop, we prove: (i) that the number of closed patterns in the adjacency matrix of ¢ is even; (ii) that the number of the closed patterns i...
Jinyan Li, Haiquan Li, Donny Soh, Limsoon Wong
NAR
2008
142views more  NAR 2008»
13 years 7 months ago
CMGSDB: integrating heterogeneous Caenorhabditis elegans data sources using compositional data mining
CMGSDB (Database for Computational Modeling of Gene Silencing) is an integration of heterogeneous data sources about Caenorhabditis elegans with capabilities for compositional dat...
Amrita Pati, Ying Jin, Karsten Klage, Richard F. H...
SDM
2004
SIAM
207views Data Mining» more  SDM 2004»
13 years 9 months ago
BAMBOO: Accelerating Closed Itemset Mining by Deeply Pushing the Length-Decreasing Support Constraint
Previous study has shown that mining frequent patterns with length-decreasing support constraint is very helpful in removing some uninteresting patterns based on the observation t...
Jianyong Wang, George Karypis
CINQ
2004
Springer
116views Database» more  CINQ 2004»
13 years 11 months ago
Contribution to Gene Expression Data Analysis by Means of Set Pattern Mining
Abstract. One of the exciting scientific challenges in functional genomics concerns the discovery of biologically relevant patterns from gene expression data. For instance, it is e...
Ruggero G. Pensa, Jérémy Besson, C&e...
BMCBI
2008
105views more  BMCBI 2008»
13 years 7 months ago
A gene pattern mining algorithm using interchangeable gene sets for prokaryotes
Background: Mining gene patterns that are common to multiple genomes is an important biological problem, which can lead us to novel biological insights. When family classification...
Meng Hu, Kwangmin Choi, Wei Su, Sun Kim, Jiong Yan...