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» Closed Set Mining of Biological Data
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JIIS
2008
133views more  JIIS 2008»
13 years 7 months ago
Maintaining frequent closed itemsets over a sliding window
In this paper, we study the incremental update of Frequent Closed Itemsets (FCIs) over a sliding window in a high-speed data stream. We propose the notion of semi-FCIs, which is to...
James Cheng, Yiping Ke, Wilfred Ng
BMCBI
2006
195views more  BMCBI 2006»
13 years 7 months ago
Hubs of knowledge: using the functional link structure in Biozon to mine for biologically significant entities
Background: Existing biological databases support a variety of queries such as keyword or definition search. However, they do not provide any measure of relevance for the instance...
Paul Shafer, Timothy Isganitis, Golan Yona
DMKD
2003
ACM
96views Data Mining» more  DMKD 2003»
14 years 28 days ago
Using transposition for pattern discovery from microarray data
We analyze expression matrices to identify a priori interesting sets of genes, e.g., genes that are frequently co-regulated. Such matrices provide expression values for given biol...
François Rioult, Jean-François Bouli...
SDM
2004
SIAM
211views Data Mining» more  SDM 2004»
13 years 9 months ago
Using Support Vector Machines for Classifying Large Sets of Multi-Represented Objects
Databases are a key technology for molecular biology which is a very data intensive discipline. Since molecular biological databases are rather heterogeneous, unification and data...
Hans-Peter Kriegel, Peer Kröger, Alexey Pryak...
BMCBI
2008
121views more  BMCBI 2008»
13 years 7 months ago
Microarray data mining using landmark gene-guided clustering
Background: Clustering is a popular data exploration technique widely used in microarray data analysis. Most conventional clustering algorithms, however, generate only one set of ...
Pankaj Chopra, Jaewoo Kang, Jiong Yang, HyungJun C...