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BMCBI
2011
13 years 1 months ago
PeakRanger: A cloud-enabled peak caller for ChIP-seq data
Background: Chromatin immunoprecipitation (ChIP), coupled with massively parallel short-read sequencing (seq) is used to probe chromatin dynamics. Although there are many algorith...
Xin Feng, Robert Grossman, Lincoln Stein
HPDC
2010
IEEE
13 years 10 months ago
Exploring application and infrastructure adaptation on hybrid grid-cloud infrastructure
Clouds are emerging as an important class of distributed computational resources and are quickly becoming an integral part of production computational infrastructures. An importan...
Hyunjoo Kim, Yaakoub El Khamra, Shantenu Jha, Mani...
3DPVT
2004
IEEE
149views Visualization» more  3DPVT 2004»
14 years 1 months ago
Fan-Meshes: A Geometric Primitive for Point-Based Description of 3D Models and Scenes
We propose a new data structure, called Fan-Meshes (FM), for reconstructing 3D models and scenes represented by dense scanning point clouds. It is a local piecewise linear approxi...
Xiaotian Yan, Fang Meng, Hongbin Zha
SDM
2008
SIAM
97views Data Mining» more  SDM 2008»
13 years 11 months ago
Efficient Distribution Mining and Classification
We define and solve the problem of "distribution classification", and, in general, "distribution mining". Given n distributions (i.e., clouds) of multi-dimensi...
Yasushi Sakurai, Rosalynn Chong, Lei Li, Christos ...
VIS
2003
IEEE
121views Visualization» more  VIS 2003»
14 years 10 months ago
Hierarchical Clustering for Unstructured Volumetric Scalar Fields
We present a method to represent unstructured scalar fields at multiple levels of detail. Using a parallelizable classification algorithm to build a cluster hierarchy, we generate...
Christopher S. Co, Bjørn Heckel, Hans Hagen...