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JCB
2007
94views more  JCB 2007»
13 years 10 months ago
A Quantile Method for Sizing Optical Maps
Optical mapping is an integrated system for the analysis of single DNA molecules. It constructs restriction maps (noted as “optical map”) from individual DNA molecules present...
Haifeng Li, Anton Valouev, David C. Schwartz, Mich...
TIT
2010
170views Education» more  TIT 2010»
13 years 5 months ago
Belief propagation estimation of protein and domain interactions using the sum-product algorithm
We present a novel framework to estimate protein-protein (PPI) and domain-domain (DDI) interactions based on a belief propagation estimation method that efficiently computes inter...
Faruck Morcos, Marcin Sikora, Mark S. Alber, Dale ...
IPPS
2009
IEEE
14 years 5 months ago
Exploring FPGAs for accelerating the phylogenetic likelihood function
Driven by novel biological wet lab techniques such as pyrosequencing there has been an unprecedented molecular data explosion over the last 2-3 years. The growth of biological seq...
Nikolaos Alachiotis, Euripides Sotiriades, Apostol...
EUROSYS
2010
ACM
14 years 8 months ago
Splitter: A Proxy-based Approach for Post-Migration Testing of Web Applications
The benefits of virtualized IT environments, such as compute clouds, have drawn interested enterprises to migrate their applications onto new platforms to gain the advantages of ...
Xiaoning Ding, Hai Huang, Yaoping Ruan, Anees Shai...
PAISI
2010
Springer
13 years 8 months ago
Efficient Privacy Preserving K-Means Clustering
Abstract. This paper introduces an efficient privacy-preserving protocol for distributed K-means clustering over an arbitrary partitioned data, shared among N parties. Clustering i...
Maneesh Upmanyu, Anoop M. Namboodiri, Kannan Srina...