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BMCBI
2008
132views more  BMCBI 2008»
13 years 7 months ago
The Average Mutual Information Profile as a Genomic Signature
Background: Occult organizational structures in DNA sequences may hold the key to understanding functional and evolutionary aspects of the DNA molecule. Such structures can also p...
Mark Bauer, Sheldon M. Schuster, Khalid Sayood
EUROSYS
2010
ACM
14 years 1 months ago
PUSH: A Dataflow Shell
The deluge of huge data sets such as those provided by sensor networks, online transactions, and the web provide exciting opportunities for data analysis. The scale of the data ...
Noah Evans, Eric Van Hensbergen
RECOMB
2002
Springer
14 years 7 months ago
Phase-independent rhythmic analysis of genome-wide expression patterns
We introduce a model-based analysis technique for extracting and characterizing rhythmic expression pro les from genome-wide DNA microarray hybridization data. These patterns are ...
Christopher James Langmead, Anthony K. Yan, C. Rob...
SBACPAD
2007
IEEE
157views Hardware» more  SBACPAD 2007»
14 years 1 months ago
Exploring Novel Parallelization Technologies for 3-D Imaging Applications
Multi-dimensional imaging techniques involve the processing of high resolution images commonly used in medical, civil and remote-sensing applications. A barrier commonly encounter...
Diego Rivera, Dana Schaa, Micha Moffie, David R. K...
SBACPAD
2006
IEEE
148views Hardware» more  SBACPAD 2006»
14 years 1 months ago
Scalable Parallel Implementation of Bayesian Network to Junction Tree Conversion for Exact Inference
We present a scalable parallel implementation for converting a Bayesian network to a junction tree, which can then be used for a complete parallel implementation for exact inferen...
Vasanth Krishna Namasivayam, Animesh Pathak, Vikto...