76 search results - page 8 / 16 » Clustered Sequence Representation for Fast Homology Search |
SC
2005
ACM
14 years 28 days ago
2005
ACM
The proliferation of biological sequence data has motivated the need for an extremely fast probabilistic sequence search. One method for performing this search involves evaluating...
CORR
2010
Springer
13 years 7 months ago
2010
Springer
Given a point set S and an unknown metric d on S, we study the problem of efficiently partitioning S into k clusters while querying few distances between the points. In our model ...
BMCBI
2007
13 years 7 months ago
2007
Background: Accurate sequence alignments are essential for homology searches and for building three-dimensional structural models of proteins. Since structure is better conserved ...
BMCBI
2008
13 years 7 months ago
2008
Background: The ESTree database (db) is a collection of Prunus persica and Prunus dulcis EST sequences that in its current version encompasses 75,404 sequences from 3 almond and 1...
BMCBI
2005
13 years 7 months ago
2005
Background: Sequence comparison by alignment is a fundamental tool of molecular biology. In this paper we show how a number of sequence comparison tasks, including the detection o...