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» Clustering Genes Using Heterogeneous Data Sources
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BMCBI
2007
148views more  BMCBI 2007»
15 years 2 months ago
Evaluation of gene-expression clustering via mutual information distance measure
Background: The definition of a distance measure plays a key role in the evaluation of different clustering solutions of gene expression profiles. In this empirical study we compa...
Ido Priness, Oded Maimon, Irad E. Ben-Gal
BMCBI
2007
168views more  BMCBI 2007»
15 years 2 months ago
GOSim - an R-package for computation of information theoretic GO similarities between terms and gene products
Background: With the increased availability of high throughput data, such as DNA microarray data, researchers are capable of producing large amounts of biological data. During the...
Holger Fröhlich, Nora Speer, Annemarie Poustk...
ACAL
2007
Springer
15 years 8 months ago
An Integrated QAP-Based Approach to Visualize Patterns of Gene Expression Similarity
Abstract. This paper illustrates how the Quadratic Assignment Problem (QAP) is used as a mathematical model that helps to produce a visualization of microarray data, based on the r...
Mario Inostroza-Ponta, Alexandre Mendes, Regina Be...
ADBIS
2005
Springer
107views Database» more  ADBIS 2005»
15 years 8 months ago
Data Integration Using DataPile Structure
Abstract. One of the areas of data integration covers systems that maintain coherence among a heterogeneous set of databases. Such a system repeatedly collects data from the local ...
David Bednárek, David Obdrzálek, Jak...
BMCBI
2008
101views more  BMCBI 2008»
15 years 2 months ago
Term-tissue specific models for prediction of gene ontology biological processes using transcriptional profiles of aging in dros
Background: Predictive classification on the base of gene expression profiles appeared recently as an attractive strategy for identifying the biological functions of genes. Gene O...
Wensheng Zhang, Sige Zou, Jiuzhou Song