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» Clustering Similarity Comparison Using Density Profiles
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BMCBI
2005
144views more  BMCBI 2005»
13 years 9 months ago
Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in
Background: Comparison of data produced on different microarray platforms often shows surprising discordance. It is not clear whether this discrepancy is caused by noisy data or b...
Scott L. Carter, Aron C. Eklund, Brigham H. Mecham...
BMCBI
2006
104views more  BMCBI 2006»
13 years 9 months ago
SinicView: A visualization environment for comparisons of multiple nucleotide sequence alignment tools
Background: Deluged by the rate and complexity of completed genomic sequences, the need to align longer sequences becomes more urgent, and many more tools have thus been developed...
Arthur Chun-Chieh Shih, D. T. Lee, Laurent Lin, Ch...
BMCBI
2005
100views more  BMCBI 2005»
13 years 9 months ago
EvDTree: structure-dependent substitution profiles based on decision tree classification of 3D environments
Background: Structure-dependent substitution matrices increase the accuracy of sequence alignments when the 3D structure of one sequence is known, and are successful e.g. in fold ...
Jean-Christophe Gelly, Laurent Chiche, Jér&...
IV
2008
IEEE
296views Visualization» more  IV 2008»
14 years 4 months ago
Revealing Subnetwork Roles using Contextual Visualization: Comparison of Metabolic Networks
This article is addressing a recurrent problem in biology: mining newly built large scale networks. Our approach consists in comparing these new networks to well known ones. The v...
Romain Bourqui, Fabien Jourdan
ICPADS
1998
IEEE
14 years 2 months ago
A Comparison of Two Torus-Based K-Coteries
We extend a torus-based coterie structure for distributed mutual exclusion to allow k multiple entries in a critical section. In the original coterie, the system nodes are logical...
S. D. Lang, L. J. Mao