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» Clustering Similarity Comparison Using Density Profiles
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BMCBI
2007
144views more  BMCBI 2007»
13 years 9 months ago
InPrePPI: an integrated evaluation method based on genomic context for predicting protein-protein interactions in prokaryotic ge
Background: Although many genomic features have been used in the prediction of proteinprotein interactions (PPIs), frequently only one is used in a computational method. After rea...
Jingchun Sun, Yan Sun, Guohui Ding, Qi Liu, Chuan ...
BMCBI
2007
176views more  BMCBI 2007»
13 years 9 months ago
Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue
Background: Micro- and macroarray technologies help acquire thousands of gene expression patterns covering important biological processes during plant ontogeny. Particularly, fait...
Marc Strickert, Nese Sreenivasulu, Björn Usad...
CANDC
2006
ACM
13 years 9 months ago
Detecting and aligning peaks in mass spectrometry data with applications to MALDI
In this paper, we address the peak detection and alignment problem in the analysis of mass spectrometry data. To deal with the peak redundancy problem existing in the MALDI data a...
Weichuan Yu, Baolin Wu, Ning Lin, Kathy Stone, Ken...
SDM
2009
SIAM
176views Data Mining» more  SDM 2009»
14 years 6 months ago
Discovery of Geospatial Discriminating Patterns from Remote Sensing Datasets.
Large amounts of remotely sensed data calls for data mining techniques to fully utilize their rich information content. In this paper, we study new means of discovery and summariz...
Wei Ding 0003, Tomasz F. Stepinski, Josue Salazar
BMCBI
2007
166views more  BMCBI 2007»
13 years 9 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour