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BMCBI
2007
166views more  BMCBI 2007»
13 years 8 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour
ESOP
2000
Springer
14 years 5 days ago
Compile-Time Debugging of C Programs Working on Trees
We exhibit a technique for automatically verifying the safety of simple C programs working on tree-shaped data structures. We do not consider the complete behavior of programs, but...
Jacob Elgaard, Anders Møller, Michael I. Sc...
FATES
2003
Springer
14 years 1 months ago
JMLAutoTest: A Novel Automated Testing Framework Based on JML and JUnit
Abstract. Writing specifications using Java Modeling Language has been accepted for a long time as a practical approach to increasing the correctness and quality of Java programs. ...
Guoqing Xu, Zongyuang Yang
BMCBI
2007
148views more  BMCBI 2007»
13 years 8 months ago
BPhyOG: An interactive server for genome-wide inference of bacterial phylogenies based on overlapping genes
Background: Overlapping genes (OGs) in bacterial genomes are pairs of adjacent genes of which the coding sequences overlap partly or entirely. With the rapid accumulation of seque...
Yingqin Luo, Cong Fu, Da-Yong Zhang, Kui Lin
BMCBI
2010
154views more  BMCBI 2010»
13 years 8 months ago
LINNAEUS: A species name identification system for biomedical literature
Background: The task of recognizing and identifying species names in biomedical literature has recently been regarded as critical for a number of applications in text and data min...
Martin Gerner, Goran Nenadic, Casey M. Bergman