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» Coding Exon Detection Using Comparative Sequences
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SIGSOFT
2007
ACM
14 years 10 months ago
Efficient token based clone detection with flexible tokenization
Code clones are similar code fragments that occur at multiple locations in a software system. Detection of code clones provides useful information for maintenance, reengineering, ...
Hamid Abdul Basit, Stan Jarzabek
RECOMB
2008
Springer
14 years 10 months ago
A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery
As an increasing number of eukaryotic genomes are being sequenced, comparative studies aimed at detecting regulatory elements in intergenic sequences are becoming more prevalent. M...
Raluca Gordân, Leelavati Narlikar, Alexander...
BMCBI
2007
180views more  BMCBI 2007»
13 years 10 months ago
Using expression arrays for copy number detection: an example from E. coli
Background: The sequencing of many genomes and tiling arrays consisting of millions of DNA segments spanning entire genomes have made high-resolution copy number analysis possible...
Dmitriy Skvortsov, Diana Abdueva, Michael E. Stitz...
GLOBECOM
2009
IEEE
14 years 1 months ago
Multi-Frame Distributed Protocol for Analog Network Coding in Slow-Fading Channels
The wireless network scenario here is based on N users that communicate one with the others through a central relay node by adopting the Analog Network Coding (ANC) paradigm. In th...
Jonathan Gambini, Umberto Spagnolini
AAAI
2004
13 years 11 months ago
PROBCONS: Probabilistic Consistency-Based Multiple Alignment of Amino Acid Sequences
Obtaining an accurate multiple alignment of protein sequences is a difficult computational problem for which many heuristic techniques sacrifice optimality to achieve reasonable r...
Chuong B. Do, Michael Brudno, Serafim Batzoglou