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» Coding Exon Detection Using Comparative Sequences
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GECCO
2006
Springer
213views Optimization» more  GECCO 2006»
14 years 1 months ago
Evolutionary unit testing of object-oriented software using strongly-typed genetic programming
Evolutionary algorithms have successfully been applied to software testing. Not only approaches that search for numeric test data for procedural test objects have been investigate...
Stefan Wappler, Joachim Wegener
ICSM
2007
IEEE
14 years 4 months ago
A Maintainable Software Architecture for Fast and Modular Bioinformatics Sequence Search
Bioinformaticists use the Basic Local Alignment Search Tool (BLAST) to characterize an unknown sequence by comparing it against a database of known sequences, thus detecting evolu...
Jeremy S. Archuleta, Eli Tilevich, Wu-chun Feng
BMCBI
2008
140views more  BMCBI 2008»
13 years 10 months ago
Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
Background: Structural alignment of RNAs is becoming important, since the discovery of functional non-coding RNAs (ncRNAs). Recent studies, mainly based on various approximations ...
Kazutaka Katoh, Hiroyuki Toh
BMCBI
2007
126views more  BMCBI 2007»
13 years 10 months ago
Multiple non-collinear TF-map alignments of promoter regions
Background: The analysis of the promoter sequence of genes with similar expression patterns is a basic tool to annotate common regulatory elements. Multiple sequence alignments ar...
Enrique Blanco, Roderic Guigó, Xavier Messe...
ICDAR
1997
IEEE
14 years 2 months ago
Document image similarity and equivalence detection
A hierarchical algorithm is presented for determining the similarity and equivalence of document images. Features extracted from the CCIIT fax-compressed representations of two im...
Jonathan J. Hull, John F. Cullen