We introduce LogGOPSim--a fast simulation framework for parallel algorithms at large-scale. LogGOPSim utilizes a slightly extended version of the well-known LogGPS model in combin...
Many scientific applications use parallel I/O to meet the low latency and high bandwidth I/O requirement. Among many available parallel I/O operations, collective I/O is one of th...
Christina M. Patrick, Seung Woo Son, Mahmut T. Kan...
In various applications such as data cleansing, being able to retrieve categorical or numerical attributes based on notions of approximate match (e.g., edit distance, numerical di...
Liang Jin, Nick Koudas, Chen Li, Anthony K. H. Tun...
Background: In order to improve gene prediction, extrinsic evidence on the gene structure can be collected from various sources of information such as genome-genome comparisons an...
Background: Pattern matching is the core of bioinformatics; it is used in database searching, restriction enzyme mapping, and finding open reading frames. It is done repeatedly ov...