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BMCBI
2010
135views more  BMCBI 2010»
13 years 7 months ago
MrsRF: an efficient MapReduce algorithm for analyzing large collections of evolutionary trees
Background: MapReduce is a parallel framework that has been used effectively to design largescale parallel applications for large computing clusters. In this paper, we evaluate th...
Suzanne Matthews, Tiffani L. Williams
NAR
2011
198views Computer Vision» more  NAR 2011»
12 years 10 months ago
PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralo
The growing availability of complete genomic sequences from diverse species has brought about the need to scale up phylogenomic analyses, including the reconstruction of large col...
Jaime Huerta-Cepas, Salvador Capella-Gutiér...
COCOA
2008
Springer
13 years 9 months ago
Elementary Approximation Algorithms for Prize Collecting Steiner Tree Problems
This paper deals with approximation algorithms for the prize collecting generalized Steiner forest problem, defined as follows. The input is an undirected graph G = (V, E), a colle...
Shai Gutner
ADT
2006
13 years 7 months ago
TICP: Transport Information Collection Protocol
We present and validate TICP, a TCP-friendly reliable transport protocol to collect information from a large number of sources spread over the Internet. TICP is a stand-alone proto...
Chadi Barakat, Mohammad Malli, Naomichi Nonaka
ANSS
2007
IEEE
14 years 1 months ago
Scalable Data Collection Protocols for Wireless Sensor Networks with Multiple Mobile Sinks
Data propagation in wireless sensor networks is usually performed as a multihop process. To deliver a single message, the resources of many sensor nodes are used and a lot of ener...
Athanasios Kinalis, Sotiris E. Nikoletseas