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DGCI
2005
Springer
14 years 1 months ago
Generalized Functionality for Arithmetic Discrete Planes
Naive discrete planes are well known to be functional on a coordinate plane. The aim of our paper is to extend the functionality concept to a larger family of arithmetic discrete ...
Valérie Berthé, Christophe Fiorio, D...
APN
2008
Springer
13 years 10 months ago
Symbolic State Space of Stopwatch Petri Nets with Discrete-Time Semantics (Theory Paper)
In this paper, we address the class of bounded Petri nets with stopwatches (SwPNs), which is an extension of T-time Petri nets (TPNs) where time is associated with transitions. Con...
Morgan Magnin, Didier Lime, Olivier H. Roux
BMCBI
2010
156views more  BMCBI 2010»
13 years 8 months ago
Protein complex prediction via verifying and reconstructing the topology of domain-domain interactions
Background: High-throughput methods for detecting protein-protein interactions enable us to obtain large interaction networks, and also allow us to computationally identify the as...
Yosuke Ozawa, Rintaro Saito, Shigeo Fujimori, Hisa...
BMCBI
2007
111views more  BMCBI 2007»
13 years 7 months ago
MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifs
Background: A combination of multiple types of transcription factors and cis-regulatory elements is often required for gene expression in eukaryotes, and the combinatorial regulat...
Mamoru Kato, Tatsuhiko Tsunoda
INFORMS
1998
150views more  INFORMS 1998»
13 years 7 months ago
Branch and Infer: A Unifying Framework for Integer and Finite Domain Constraint Programming
constraint abstractions into integer programming, and to discuss possible combinations of the two approaches. Combinatorial problems are ubiquitous in many real world applications ...
Alexander Bockmayr, Thomas Kasper