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CPM
2005
Springer
14 years 2 months ago
2005
Springer
Abstract. The Knuth-Morris-Pratt (KMP) pattern-matching algorithm guarantees both independence from alphabet size and worst-case execution time linear in the pattern length; on the...
CPM
2000
Springer
14 years 23 days ago
2000
Springer
We present a new index for approximate string matching. The index collects text q-samples, that is, disjoint text substrings of length q, at fixed intervals and stores their posi...
CPM
1999
Springer
14 years 22 days ago
1999
Springer
This paper examines some of the rich structure of the syntenic distance model of evolutionary distance, introduced by Ferretti et al. (1996). The syntenic distance between two gen...
COCOON
2006
Springer
14 years 5 days ago
2006
Springer
Abstract. A circular-arc model (C, A) is a circle C together with a collection A of arcs of C. If A satisfies the Helly Property then (C, A) is a Helly circular-arc model. A (Helly...
CPM
1999
Springer
14 years 22 days ago
1999
Springer
In sequencing by hybridization (SBH), one has to reconstruct a sequence from its l-long substrings. SBH was proposed as an alternative to gel-based DNA sequencing approaches, but ...