Sciweavers

95 search results - page 17 / 19
» Combinatorics on words
Sort
View
COCOON
1999
Springer
14 years 21 days ago
An External Memory Data Structure for Shortest Path Queries
We present results related to satisfying shortest path queries on a planar graph stored in external memory. Let N denote the number of vertices in the graph and let sort(N) denote...
David A. Hutchinson, Anil Maheshwari, Norbert Zeh
JCB
2008
108views more  JCB 2008»
13 years 8 months ago
Asymptotics of RNA Shapes
Abstract. RNA shapes, introduced by Giegerich et al. (17), provide a useful classification of the branching complexity for RNA secondary structures. In this paper, we derive an exa...
W. A. Lorenz, Yann Ponty, Peter Clote
TALG
2008
97views more  TALG 2008»
13 years 8 months ago
On an infinite family of solvable Hanoi graphs
The Tower of Hanoi problem is generalized by placing pegs on the vertices of a given directed graph G with two distinguished vertices, S and D, and allowing moves only along arcs o...
Dany Azriel, Noam Solomon, Shay Solomon
JCB
2008
111views more  JCB 2008»
13 years 8 months ago
Sorting Genomes with Centromeres by Translocations
A centromere is a special region in the chromosome that plays a vital role during cell division. Every new chromosome created by a genome rearrangement event must have a centromer...
Michal Ozery-Flato, Ron Shamir
CPM
2007
Springer
99views Combinatorics» more  CPM 2007»
14 years 2 months ago
Speeding Up HMM Decoding and Training by Exploiting Sequence Repetitions
We present a method to speed up the dynamic program algorithms used for solving the HMM decoding and training problems for discrete time-independent HMMs. We discuss the applicatio...
Shay Mozes, Oren Weimann, Michal Ziv-Ukelson