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    BMCBI
    2004
    169views more  BMCBI 2004»
    A power law global error model for the identification of differentially expressed genes in microarray data
    13 years 7 months ago
    A power law global error model for the identification of differentially expressed genes in microarray data
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    Background: High-density oligonucleotide microarray technology enables the discovery of genes that are transcriptionally modulated in different biological samples due to physiolog...
    Norman Pavelka, Mattia Pelizzola, Caterina Vizzard...
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    BMCBI
    2006
    174views more  BMCBI 2006»
    CARAT: A novel method for allelic detection of DNA copy number changes using high density oligonucleotide arrays
    13 years 7 months ago
    CARAT: A novel method for allelic detection of DNA copy number changes using high density oligonucleotide arrays
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    Background: DNA copy number alterations are one of the main characteristics of the cancer cell karyotype and can contribute to the complex phenotype of these cells. These alterati...
    Jing Huang, Wen Wei, Joyce Chen, Jane Zhang, Guoyi...
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    BMCBI
    2006
    119views more  BMCBI 2006»
    Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip stu
    13 years 7 months ago
    Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip stu
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    Background: The choice of probe set algorithms for expression summary in a GeneChip study has a great impact on subsequent gene expression data analysis. Spiked-in cRNAs with know...
    Zihua Hu, Gail R. Willsky
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    BMCBI
    2007
    176views more  BMCBI 2007»
    Genome Expression Pathway Analysis Tool - Analysis and visualization of microarray gene expression data under genomic, proteomic
    13 years 7 months ago
    Genome Expression Pathway Analysis Tool - Analysis and visualization of microarray gene expression data under genomic, proteomic
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    Background: Regulation of gene expression is relevant to many areas of biology and medicine, in the study of treatments, diseases, and developmental stages. Microarrays can be use...
    Markus Weniger, Julia C. Engelmann, Jörg Schu...
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    BMCBI
    2005
    121views more  BMCBI 2005»
    Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data
    13 years 7 months ago
    Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data
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    Background: A critical step in processing oligonucleotide microarray data is combining the information in multiple probes to produce a single number that best captures the express...
    Kerby Shedden, Wei Chen, Rork Kuick, Debashis Ghos...
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