The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving various...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
—Segmentation, the task of splitting a long sequence of discrete symbols into chunks, can provide important information about the nature of the sequence that is understandable to...
Background: Whole-genome sequence alignment is an essential process for extracting valuable information about the functions, evolution, and peculiarities of genomes under investig...
Sequence segmentation is a flexible and highly accurate mechanism for modeling several applications. Inference on segmentation models involves dynamic programming computations tha...
Background: The number of available genome sequences is increasing, and easy-to-use software that enables efficient comparative analysis is needed. Results: We developed GenomeMat...