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143
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BMCBI
2004
148views more  BMCBI 2004»
15 years 2 months ago
Bioinformatics analysis of SARS coronavirus genome polymorphism
Background: We have compared 38 isolates of the SARS-CoV complete genome. The main goal was twofold: first, to analyze and compare nucleotide sequences and to identify positions o...
Gordana Pavlovic-Lazetic, Nenad S. Mitic, Milos V....
118
Voted
AVI
2004
15 years 3 months ago
Exploratory visualization using bracketing
There are many tools that provide the user with an abundance of sliders, buttons and options to change; such tools are popular in exploratory visualization. As the user changes th...
Jonathan C. Roberts
BMCBI
2008
103views more  BMCBI 2008»
15 years 2 months ago
TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model
Background: Protein structure analysis and comparison are major challenges in structural bioinformatics. Despite the existence of many tools and algorithms, very few of them have ...
Mallika Veeramalai, Yuzhen Ye, Adam Godzik
130
Voted
BIOINFORMATICS
2011
14 years 9 months ago
All-atom knowledge-based potential for RNA structure prediction and assessment
Motivation: Over the recent years, the vision that RNA simply serves as information transfer molecule has dramatically changed. The study of the sequence/structure/function relati...
Emidio Capriotti, Tomás Norambuena, Marc A....
154
Voted
BMCBI
2004
138views more  BMCBI 2004»
15 years 2 months ago
Constraint Logic Programming approach to protein structure prediction
Background: The protein structure prediction problem is one of the most challenging problems in biological sciences. Many approaches have been proposed using database information ...
Alessandro Dal Palù, Agostino Dovier, Feder...