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BMCBI
2004
211views more  BMCBI 2004»
13 years 7 months ago
GenomeViz: visualizing microbial genomes
Background: An increasing number of microbial genomes are being sequenced and deposited in public databases. In addition, several closely related strains are also being sequenced ...
Rohit Ghai, Torsten Hain, Trinad Chakraborty
BMCBI
2007
233views more  BMCBI 2007»
13 years 8 months ago
160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
Isaac T. S. Li, Warren Shum, Kevin Truong
BMCBI
2004
105views more  BMCBI 2004»
13 years 7 months ago
eL-DASionator: an LDAS upload file generator
Background: The Distributed Annotation System (DAS) allows merging of DNA sequence annotations from multiple sources and provides a single annotation view. A straightforward way t...
Vincent Nègre, Christoph Grunau
ICIP
2005
IEEE
14 years 9 months ago
Video compression using structural flow
This paper proposes a new technique in wavelet video compression that exploits the spatiotemporal regularity of the video. A sequence of frames is said to be regular along the dire...
Orkun Alatas, Omar Javed, Mubarak Shah
ICPR
2006
IEEE
14 years 9 months ago
Affine Invariant Dynamic Time Warping and its Application to Online Rotated Handwriting Recognition
Dynamic Time Warping (DTW) has been widely used to align and compare two sequences. DTW can efficiently deal with local warp or deformation between sequences. However, it can'...
Yu Qiao, Makoto Yasuhara