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» Comparing sequence scaffolds
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153
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SSDBM
2010
IEEE
220views Database» more  SSDBM 2010»
15 years 6 months ago
Prefix Tree Indexing for Similarity Search and Similarity Joins on Genomic Data
Similarity search and similarity join on strings are important for applications such as duplicate detection, error detection, data cleansing, or comparison of biological sequences....
Astrid Rheinländer, Martin Knobloch, Nicky Ho...
141
Voted
KDD
2007
ACM
182views Data Mining» more  KDD 2007»
16 years 2 months ago
A fast algorithm for finding frequent episodes in event streams
Frequent episode discovery is a popular framework for mining data available as a long sequence of events. An episode is essentially a short ordered sequence of event types and the...
Srivatsan Laxman, P. S. Sastry, K. P. Unnikrishnan
RECOMB
2006
Springer
16 years 2 months ago
New Methods for Detecting Lineage-Specific Selection
Abstract. So far, most methods for identifying sequences under selection based on comparative sequence data have either assumed selectional pressures are the same across all branch...
Adam C. Siepel, Katherine S. Pollard, David Haussl...
120
Voted
SDM
2009
SIAM
170views Data Mining» more  SDM 2009»
15 years 11 months ago
Optimal Distance Bounds on Time-Series Data.
Most data mining operations include an integral search component at their core. For example, the performance of similarity search or classification based on Nearest Neighbors is ...
Michail Vlachos, Philip S. Yu, Suleyman S. Kozat
ISSTA
2006
ACM
15 years 8 months ago
Test input generation for java containers using state matching
The popularity of object-oriented programming has led to the wide use of container libraries. It is important for the reliability of these containers that they are tested adequate...
Willem Visser, Corina S. Pasareanu, Radek Pel&aacu...