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BMCBI
2010
90views more  BMCBI 2010»
13 years 7 months ago
Local alignment of generalized k-base encoded DNA sequence
Background: DNA sequence comparison is a well-studied problem, in which two DNA sequences are compared using a weighted edit distance. Recent DNA sequencing technologies however o...
Nils Homer, Stanley F. Nelson, Barry Merriman
LREC
2010
169views Education» more  LREC 2010»
13 years 9 months ago
Using Comparable Corpora to Adapt a Translation Model to Domains
Statistical machine translation (SMT) requires a large parallel corpus, which is available only for restricted language pairs and domains. To expand the language pairs and domains...
Hiroyuki Kaji, Takashi Tsunakawa, Daisuke Okada
PPOPP
2009
ACM
14 years 8 months ago
Comparability graph coloring for optimizing utilization of stream register files in stream processors
A stream processor executes an application that has been decomposed into a sequence of kernels that operate on streams of data elements. During the execution of a kernel, all stre...
Xuejun Yang, Li Wang, Jingling Xue, Yu Deng, Ying ...
SPE
2008
91views more  SPE 2008»
13 years 7 months ago
A multiple layer model to compare RNA secondary structures
composed of various graphs linked together by relations of abstraction/refinement. The new structure is useful for representing information that can be described at t levels of abs...
Julien Allali, Marie-France Sagot
ISPA
2005
Springer
14 years 1 months ago
COMPACT: A Comparative Package for Clustering Assessment
Abstract. There exist numerous algorithms that cluster data-points from largescale genomic experiments such as sequencing, gene-expression and proteomics. Such algorithms may emplo...
Roy Varshavsky, Michal Linial, David Horn