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    » Comparison of Approaches to Egomotion Computation
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    BMCBI
    2008
    144views more  BMCBI 2008»
    Local conservation scores without a priori assumptions on neutral substitution rates
    13 years 6 months ago
    Local conservation scores without a priori assumptions on neutral substitution rates
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    Background: Comparative genomics aims to detect signals of evolutionary conservation as an indicator of functional constraint. Surprisingly, results of the ENCODE project revealed...
    Janis Dingel, Pavol Hanus, Niccolò Leonardi...
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    BMCBI
    2007
    130views more  BMCBI 2007»
    Exploiting residue-level and profile-level interface propensities for usage in binding sites prediction of proteins
    13 years 6 months ago
    Exploiting residue-level and profile-level interface propensities for usage in binding sites prediction of proteins
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    Background: Recognition of binding sites in proteins is a direct computational approach to the characterization of proteins in terms of biological and biochemical function. Residu...
    Qiwen Dong, Xiaolong Wang, Lei Lin, Yi Guan
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    BMCBI
    2007
    124views more  BMCBI 2007»
    Analysis on multi-domain cooperation for predicting protein-protein interactions
    13 years 6 months ago
    Analysis on multi-domain cooperation for predicting protein-protein interactions
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    Background: Domains are the basic functional units of proteins. It is believed that protein-protein interactions are realized through domain interactions. Revealing multi-domain c...
    Rui-Sheng Wang, Yong Wang, Ling-Yun Wu, Xiang-Sun ...
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    BMCBI
    2010
    177views more  BMCBI 2010»
    Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets
    13 years 6 months ago
    Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets
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    Background: Phylogenetic analysis can be used to divide a protein family into subfamilies in the absence of experimental information. Most phylogenetic analysis methods utilize mu...
    Aydin Albayrak, Hasan H. Otu, Ugur O. Sezerman
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    BMCBI
    2008
    121views more  BMCBI 2008»
    ReAlignerV: Web-based genomic alignment tool with high specificity and robustness estimated by species-specific insertion sequen
    13 years 6 months ago
    ReAlignerV: Web-based genomic alignment tool with high specificity and robustness estimated by species-specific insertion sequen
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    Background: Detecting conserved noncoding sequences (CNSs) across species highlights the functional elements. Alignment procedures combined with computational prediction of transc...
    Hisakazu Iwama, Yukio Hori, Kensuke Matsumoto, Koj...
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