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BMCBI
2006
113views more  BMCBI 2006»
13 years 7 months ago
QualitySNP: a pipeline for detecting single nucleotide polymorphisms and insertions/deletions in EST data from diploid and polyp
Background: Single nucleotide polymorphisms (SNPs) are important tools in studying complex genetic traits and genome evolution. Computational strategies for SNP discovery make use...
Jifeng Tang, Ben Vosman, Roeland E. Voorrips, C. G...
BMCBI
2010
102views more  BMCBI 2010»
13 years 7 months ago
Identification of recurrent regions of copy-number variants across multiple individuals
Background: Algorithms and software for CNV detection have been developed, but they detect the CNV regions sample-by-sample with individual-specific breakpoints, while common CNV ...
Teo Shu Mei, Agus Salim, Stefano Calza, Ku Chee Se...
ICSM
2007
IEEE
14 years 1 months ago
Evaluation of Semantic Interference Detection in Parallel Changes: an Exploratory Experiment
Parallel developments are becoming increasingly prevalent in the building and evolution of large-scale software systems. Our previous studies of a large industrial project showed ...
Danhua Shao, Sarfraz Khurshid, Dewayne E. Perry
ICSM
2008
IEEE
14 years 1 months ago
Understanding the rationale for updating a function's comment
Up-to-date comments are critical for the successful evolution of a software application. When modifying a function, developers may update the comment associated with the function ...
Haroon Malik, Istehad Chowdhury, Hsiao-Ming Tsou, ...
BMCBI
2007
174views more  BMCBI 2007»
13 years 7 months ago
ESTuber db: an online database for Tuber borchii EST sequences
Background: The ESTuber database (http://www.itb.cnr.it/estuber) includes 3,271 Tuber borchii expressed sequence tags (EST). The dataset consists of 2,389 sequences from an in-hou...
Barbara Lazzari, Andrea Caprera, Cristian Cosentin...