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    » Comparison of Statistical Significance Criteria
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    BMCBI
    2010
    135views more  BMCBI 2010»
    Delineation of amplification, hybridization and location effects in microarray data yields better-quality normalization
    13 years 8 months ago
    Delineation of amplification, hybridization and location effects in microarray data yields better-quality normalization
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    Background: Oligonucleotide arrays have become one of the most widely used high-throughput tools in biology. Due to their sensitivity to experimental conditions, normalization is ...
    Marc Hulsman, Anouk Mentink, Eugene P. van Someren...
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    BMCBI
    2010
    109views more  BMCBI 2010»
    Free energy estimation of short DNA duplex hybridizations
    13 years 8 months ago
    Free energy estimation of short DNA duplex hybridizations
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    Background: Estimation of DNA duplex hybridization free energy is widely used for predicting cross-hybridizations in DNA computing and microarray experiments. A number of software...
    Dan C. Tulpan, Mirela Andronescu, Serge Leger
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    BMCBI
    2006
    98views more  BMCBI 2006»
    In search of functional association from time-series microarray data based on the change trend and level of gene expression
    13 years 8 months ago
    In search of functional association from time-series microarray data based on the change trend and level of gene expression
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    Background: The increasing availability of time-series expression data opens up new possibilities to study functional linkages of genes. Present methods used to infer functional l...
    Feng He, An-Ping Zeng
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    BMCBI
    2007
    101views more  BMCBI 2007»
    Gene expression changes induced by the tumorigenic pyrrolizidine alkaloid riddelliine in liver of Big Blue rats
    13 years 8 months ago
    Gene expression changes induced by the tumorigenic pyrrolizidine alkaloid riddelliine in liver of Big Blue rats
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    Background: Pyrrolizidine alkaloids (PAs) are probably the most common plant constituents that poison livestock, wildlife, and humans worldwide. Riddelliine is isolated from plant...
    Nan Mei, Lei Guo, Ruqing Liu, James C. Fuscoe, Tao...
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    BMCBI
    2010
    158views more  BMCBI 2010»
    Validation of differential gene expression algorithms: Application comparing fold-change estimation to hypothesis testing
    13 years 8 months ago
    Validation of differential gene expression algorithms: Application comparing fold-change estimation to hypothesis testing
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    Background: Sustained research on the problem of determining which genes are differentially expressed on the basis of microarray data has yielded a plethora of statistical algorit...
    Corey M. Yanofsky, David R. Bickel
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