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JUCS
2007
90views more  JUCS 2007»
13 years 7 months ago
High-level Structured Interactive Programs with Registers and Voices
Abstract: A model (consisting of rv-systems), a core programming language (for developing rv-programs), several specification and analysis techniques appropriate for modeling, pro...
Alexandru Popa, Alexandru Sofronia, Gheorghe Stefa...
ASE
2002
160views more  ASE 2002»
13 years 7 months ago
Proving Invariants of I/O Automata with TAME
This paper describes a specialized interface to PVS called TAME (Timed Automata Modeling Environment) which provides automated support for proving properties of I/O automata. A maj...
Myla Archer, Constance L. Heitmeyer, Elvinia Ricco...
BMCBI
2004
208views more  BMCBI 2004»
13 years 7 months ago
Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
Vadim Alexandrov, Mark Gerstein
BMCBI
2004
124views more  BMCBI 2004»
13 years 7 months ago
Tests for finding complex patterns of differential expression in cancers: towards individualized medicine
Background: Microarray studies in cancer compare expression levels between two or more sample groups on thousands of genes. Data analysis follows a population-level approach (e.g....
James Lyons-Weiler, Satish Patel, Michael J. Becic...
BMCBI
2004
156views more  BMCBI 2004»
13 years 7 months ago
GeneXplorer: an interactive web application for microarray data visualization and analysis
Background: When publishing large-scale microarray datasets, it is of great value to create supplemental websites where either the full data, or selected subsets corresponding to ...
Christian A. Rees, Janos Demeter, John C. Matese, ...