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BMCBI
2005
97views more  BMCBI 2005»
13 years 7 months ago
Comparative mapping of sequence-based and structure-based protein domains
Background: Protein domains have long been an ill-defined concept in biology. They are generally described as autonomous folding units with evolutionary and functional independenc...
Ya Zhang, John-Marc Chandonia, Chris H. Q. Ding, S...
PE
2010
Springer
140views Optimization» more  PE 2010»
13 years 6 months ago
KPC-Toolbox: Best recipes for automatic trace fitting using Markovian Arrival Processes
We present the KPC-Toolbox, a library of MATLAB scripts for fitting workload traces into Markovian Arrival Processes (MAPs) in an automatic way based on the recently proposed Kro...
Giuliano Casale, Eddy Z. Zhang, Evgenia Smirni
ECAI
2000
Springer
14 years 4 days ago
An Embedding of ConGolog in 3APL
Several high-level programming languages for programming agents and robots have been proposed in recent years. Each of these languages has its own features and merits. It is still...
Koen V. Hindriks, Yves Lespérance, Hector J...
BMCBI
2010
127views more  BMCBI 2010»
13 years 8 months ago
Computational prediction of type III secreted proteins from gram-negative bacteria
Background: Type III secretion system (T3SS) is a specialized protein delivery system in gramnegative bacteria that injects proteins (called effectors) directly into the eukaryoti...
Yang Yang, Jiayuan Zhao, Robyn L. Morgan, Wenbo Ma...
BMCBI
2007
112views more  BMCBI 2007»
13 years 8 months ago
PFAAT version 2.0: A tool for editing, annotating, and analyzing multiple sequence alignments
Background: By virtue of their shared ancestry, homologous sequences are similar in their structure and function. Consequently, multiple sequence alignments are routinely used to ...
Daniel R. Caffrey, Paul H. Dana, Vidhya Mathur, Ma...