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» Computability of Models for Sequence Assembly
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MIDDLEWARE
2004
Springer
14 years 2 months ago
Toward a standard ubiquitous computing framework
This paper surveys a variety of subsystems designed to be the building blocks from which sophisticated infrastructures for ubiquitous computing are assembled. Our experience shows...
Martin Modahl, Bikash Agarwalla, Gregory D. Abowd,...
CIBCB
2007
IEEE
14 years 23 days ago
Prediction of Enzyme Catalytic Sites from Sequence Using Neural Networks
The accurate prediction of enzyme catalytic sites remains an open problem in bioinformatics. Recently, several structure-based methods have become popular; however, few robust seq...
Swati Pande, Amar Raheja, Dennis R. Livesay
CONTEXT
2003
Springer
14 years 2 months ago
Unpacking Meaning from Words: A Context-Centered Approach to Computational Lexicon Design
Abstract. The knowledge representation tradition in computational lexicon design represents words as static encapsulations of purely lexical knowledge. We suggest that this view po...
Hugo Liu
RECOMB
2006
Springer
14 years 9 months ago
Evolution of Tandemly Repeated Sequences Through Duplication and Inversion
Abstract. Given a phylogenetic tree T for a family of tandemly repeated genes and their signed order O on the chromosome, we aim to find the minimum number of inversions compatible...
Denis Bertrand, Mathieu Lajoie, Nadia El-Mabrouk, ...
RECOMB
2005
Springer
14 years 9 months ago
Stability of Rearrangement Measures in the Comparison of Genome Sequences
We present data-analytic and statistical tools for studying rates of rearrangement of whole genomes and to assess the stability of these methods with changes in the level of resol...
David Sankoff, Matthew Mazowita