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SAS
2004
Springer
14 years 3 months ago
Spatial Analysis of BioAmbients
Abstract. Programming language technology can contribute to the development and understanding of Systems Biology by providing formal calculi for specifying and analysing the dynami...
Hanne Riis Nielson, Flemming Nielson, Henrik Pileg...
POPL
2008
ACM
14 years 10 months ago
Systems biology, models, and concurrency
Models will play a central role in the representation, storage, manipulation, and communication of knowledge in systems biology. Models capable of fulfilling such a role will like...
Walter Fontana
BIRTHDAY
2010
Springer
13 years 7 months ago
Some Thoughts on the Semantics of Biocharts
Abstract. This paper combines three topics to which Amir Pnueli contributed significantly: the semantics of languages for concurrency, the semantics of statecharts, and reactive an...
David Harel, Hillel Kugler
JIB
2007
95views more  JIB 2007»
13 years 9 months ago
Integration of constraints documented in SBML, SBO, and the SBML Manual facilitates validation of biological models
The creation of quantitative, simulatable, Systems Biology Markup Language (SBML) models that accurately simulate the system under study is a time-intensive manual process that re...
Allyson L. Lister, Matthew R. Pocock, Anil Wipat