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AAIM
2007
Springer
106views Algorithms» more  AAIM 2007»
15 years 8 months ago
A New Efficient Algorithm for Computing the Longest Common Subsequence
Abstract. The Longest Common Subsequence (LCS) problem is a classic and well-studied problem in computer science. The LCS problem is a common task in DNA sequence analysis with man...
M. Sohel Rahman, Costas S. Iliopoulos
JPDC
2006
134views more  JPDC 2006»
15 years 4 months ago
Fast shared-memory algorithms for computing the minimum spanning forest of sparse graphs
Minimum Spanning Tree (MST) is one of the most studied combinatorial problems with practical applications in VLSI layout, wireless communication, and distributed networks, recent ...
David A. Bader, Guojing Cong
AHS
2007
IEEE
226views Hardware» more  AHS 2007»
15 years 10 months ago
Application of Self-Configurability for Autonomous, Highly-Localized Self-Regulation
In this paper, key features of biological vs. artificial systems are identified, along with a synopsis of important consequences of those features. An artificial substrate that co...
Nicholas J. Macias, Peter M. Athanas
CPM
2004
Springer
156views Combinatorics» more  CPM 2004»
15 years 9 months ago
A Computational Model for RNA Multiple Structural Alignment.
Abstract. This paper addresses the problem of aligning multiple sequences of non-coding RNA genes. We approach this problem with the biologically motivated paradigm that scoring of...
Eugene Davydov, Serafim Batzoglou
RECOMB
2001
Springer
16 years 4 months ago
Towards predicting coiled-coil protein interactions
Protein-protein interactions play a central role in many cellular functions, and as whole-genome data accumulates, computational methods for predicting these interactions become i...
Mona Singh, Peter S. Kim