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RECOMB
2006
Springer
16 years 5 months ago
Improving Prediction of Zinc Binding Sites by Modeling the Linkage Between Residues Close in Sequence
Abstract. We describe and empirically evaluate machine learning methods for the prediction of zinc binding sites from protein sequences. We start by observing that a data set consi...
Sauro Menchetti, Andrea Passerini, Paolo Frasconi,...
RECOMB
2005
Springer
16 years 5 months ago
The Incompatible Desiderata of Gene Cluster Properties
Abstract. There is widespread interest in comparative genomics in determining if historically and/or functionally related genes are spatially clustered in the genome, and whether t...
Rose Hoberman, Dannie Durand
117
Voted
RECOMB
2005
Springer
16 years 5 months ago
A Partial Solution to the C-Value Paradox
In the half-century since the C-value paradox (the apparent lack of correlation between organismal genome size and morphological complexity) was described, there have been no expli...
Jeffrey M. Marcus
RECOMB
2005
Springer
16 years 5 months ago
Reversals of Fortune
Abstract. The objective function of the genome rearrangement problems allows the integration of other genome-level problems so that they may be solved simultaneously. Three example...
David Sankoff, Chunfang Zheng, Aleksander Lenert
112
Voted
RECOMB
2005
Springer
16 years 5 months ago
A Practical Approach to Significance Assessment in Alignment with Gaps
Abstract. Current numerical methods for assessing the statistical significance of local alignments with gaps are time consuming. Analytical solutions thus far have been limited to ...
Nicholas Chia, Ralf Bundschuh