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127
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RECOMB
2004
Springer
16 years 5 months ago
2004
Springer
In this paper we describe an algorithm for the localization of structured models, i.e. sequences of (simple) motifs and distance constraints. It basically combines standard patter...
107
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RECOMB
2003
Springer
16 years 5 months ago
2003
Springer
We study a design and optimization problem that occurs, for example, when single nucleotide polymorphisms (SNPs) are to be genotyped using a universal DNA tag array. The problem o...
133
Voted
RECOMB
2003
Springer
16 years 5 months ago
2003
Springer
It is shown that structural similarity between proteins can be decided well with much less information than what is used in common similarity measures. The full C representation c...
127
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RECOMB
2002
Springer
16 years 5 months ago
2002
Springer
We develop techniques to estimate the statistical significance of gap-free alignments between two genomic DNA sequences, using human-mouse alignments as an example. The sequences ...
131
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RECOMB
2001
Springer
16 years 5 months ago
2001
Springer
We present a novel distance-based algorithm for evolutionary tree reconstruction. Our algorithm reconstructs the topology of a tree with n leaves in O(n2 ) time using O(n) working...