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ESAW
2008
Springer
13 years 11 months ago
Engineering Self-modeling Systems: Application to Biology
Complexity of today's systems prevents designers from knowing everything about them and makes engineering them a difficult task for which classical engineering approaches are ...
Carole Bernon, Davy Capera, Jean-Pierre Mano
RECOMB
2007
Springer
14 years 10 months ago
Selecting Genomes for Reconstruction of Ancestral Genomes
It is often impossible to sequence all descendent genomes to reconstruct an ancestral genome. In addition, more genomes do not necessarily give a higher accuracy for the reconstruc...
Guoliang Li, Jian Ma, Louxin Zhang
LSGRID
2004
Springer
14 years 3 months ago
Distributed Cell Biology Simulations with E-Cell System
Many useful applications of simulation in computational cell biology, e.g. kinetic parameter estimation, Metabolic Control Analysis (MCA), and bifurcation analysis, require a large...
Masahiro Sugimoto, Kouichi Takahashi, Tomoya Kitay...
TCBB
2011
13 years 5 months ago
Semi-Markov Models for Brownian Dynamics Permeation in Biological Ion Channels
—Constructing accurate computational models that explain how ions permeate through a biological ion channel is an important problem in biophysics and drug design. Brownian dynami...
Vikram Krishnamurthy, Kai Yiu Luk
DNA
2009
Springer
120views Bioinformatics» more  DNA 2009»
14 years 4 months ago
Strand Algebras for DNA Computing
We present a process algebra for DNA computing, discussing compilation of other formal systems into the algebra, and compilation of the algebra into DNA structures.
Luca Cardelli